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Welcome to MBRole (Metabolites Biological Role)

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MBRole performs overrepresentation (enrichment) analysis of categorical annotations for a set of compounds of interest. These categorical annotations correspond to biological and chemical information available in a number of public databases and software. Current annotations include:

  • Biological annotations
    • Pathways (from KEGG and SMPDB)
    • Enzyme interactions (from KEGG)
    • Other interactions (from KEGG)
    • Diseases (from HMDB)
    • Tissue, biofluid and cellular location (from HMDB)
    • Pharmacological action (from PubChem)
    • Biological role, chemical role and application (from ChEBI and KEGG)
  • Chemical annotations
    • Chemical taxonomy (from HMDB)
    • Chemical groups (from Checkmol)

References

If you use Mbrole, please cite the following article:

Chagoyen, M. and Pazos, F. (2011) 'MBRole: enrichment analysis of metabolomic data' Bioinformatics 27: 730-731

Feedback

Did you miss some relevant annotations? Are you interested in adding pre-compiled background sets?... We want to hear from you to improve MBRole. Please write your comments and suggestions to monica.chagoyen/at/cnb.csic.es