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BLASTP 2.2.16 [Mar-11-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

Reference:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei 
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and 
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST 
protein database searches with composition-based statistics 
and other refinements", Nucleic Acids Res. 29:2994-3005.

RID: 1174309748-26130-139621659241.BLASTQ4


Database: Non-redundant SwissProt sequences
           237,168 sequences; 88,903,512 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs


Results of PSI-Blast iteration 1
Taxonomy reports
Query=  RPE_YEAST
Length=238


Distribution of 70 Blast Hits on the Query Sequence




Legend:

New sequence mark - means that the alignment score was below the threshold on the previous iteration

Checked mark - means that the alignment was checked on the previous iteration


Hit list size
Distance tree of resultsNew  

Sequences with E-value BETTER than threshold
    Score E Sequences producing significant alignments:    (Bits) Value New sequence mark gi|1173139|sp|P46969|RPE_YEAST Ribulose-phosphate 3-epimerase... 482 4e-136 Gene info New sequence mark gi|51701877|sp|Q6FL81|RPE_CANGA Ribulose-phosphate 3-epimeras... 407 1e-113 New sequence mark gi|51701884|sp|Q755M2|RPE_ASHGO Ribulose-phosphate 3-epimeras... 381 1e-105 Gene info New sequence mark gi|34924986|sp|Q96AT9|RPE_HUMAN Ribulose-phosphate 3-epimeras... 259 7e-69 Gene info New sequence mark gi|34924979|sp|Q8VEE0|RPE_MOUSE Ribulose-phosphate 3-epimerase ( 257 2e-68 Gene info New sequence mark gi|75061668|sp|Q5R5Y2|RPE_PONPY Ribulose-phosphate 3-epimeras... 257 3e-68 New sequence mark gi|60390595|sp|Q9SE42|RPE1_ORYSA Ribulose-phosphate 3-epimera... 230 3e-60 New sequence mark gi|51701874|sp|O14105|RPE_SCHPO Ribulose-phosphate 3-epimeras... 229 6e-60 New sequence mark gi|18203210|sp|Q9L0Z5|RPE_STRCO Ribulose-phosphate 3-epimeras... 196 7e-50 New sequence mark gi|54039256|sp|P65761|RPE_MYCBO Ribulose-phosphate 3-epimeras... 186 7e-47 New sequence mark gi|17380276|sp|Q9CCP9|RPE_MYCLE Ribulose-phosphate 3-epimeras... 182 1e-45 New sequence mark gi|6647758|sp|O34557|RPE_BACSU Ribulose-phosphate 3-epimerase... 171 2e-42 New sequence mark gi|2829613|sp|P74061|RPE_SYNY3 Ribulose-phosphate 3-epimerase... 163 4e-40 Gene info New sequence mark gi|6226024|sp|O67098|RPE_AQUAE Ribulose-phosphate 3-epimerase... 159 9e-39 New sequence mark gi|2499728|sp|Q43843|RPE_SOLTU Ribulose-phosphate 3-epimerase... 157 5e-38 New sequence mark gi|6647759|sp|O66107|RPE_TREPA Ribulose-phosphate 3-epimerase... 156 6e-38 New sequence mark gi|6094119|sp|P51012|RPE_RHOCA Ribulose-phosphate 3-epimerase... 155 1e-37 New sequence mark gi|84028110|sp|P0AG09|RPE_ECO57 Ribulose-phosphate 3-epimeras... 154 3e-37 New sequence mark gi|25091192|sp|Q8K940|RPE_BUCAP Ribulose-phosphate 3-epimeras... 153 6e-37 New sequence mark gi|2833386|sp|Q43157|RPE_SPIOL Ribulose-phosphate 3-epimerase... 152 7e-37 New sequence mark gi|109940150|sp|Q9ZTP5|RPE_ORYSA Ribulose-phosphate 3-epimera... 152 1e-36 New sequence mark gi|11387063|sp|P57603|RPE_BUCAI Ribulose-phosphate 3-epimeras... 151 2e-36 New sequence mark gi|6226025|sp|Q9Z8Z9|RPE_CHLPN Ribulose-phosphate 3-epimerase... 151 2e-36 New sequence mark gi|6226026|sp|O84123|RPE_CHLTR Ribulose-phosphate 3-epimerase... 149 6e-36 New sequence mark gi|14195180|sp|Q9PKR7|RPE_CHLMU Ribulose-phosphate 3-epimeras... 147 3e-35 New sequence mark gi|1169389|sp|P45455|RPE_SERMA Ribulose-phosphate 3-epimerase... 144 3e-34 New sequence mark gi|1169388|sp|P44756|RPE_HAEIN Ribulose-phosphate 3-epimerase... 144 4e-34 New sequence mark gi|2833527|sp|Q58093|RPE_METJA Ribulose-phosphate 3-epimerase... 143 7e-34 New sequence mark gi|729235|sp|P40117|RPEC_RALEH Ribulose-phosphate 3-epimerase... 140 4e-33 New sequence mark gi|729236|sp|Q04539|RPEP_RALEH Ribulose-phosphate 3-epimerase... 137 3e-32 New sequence mark gi|6647760|sp|Q9ZJ75|RPE_HELPJ Ribulose-phosphate 3-epimerase... 130 5e-30 Gene info New sequence mark gi|2851605|sp|P51013|RPE_RHORU Ribulose-phosphate 3-epimerase... 128 2e-29 New sequence mark gi|46396626|sp|Q89A59|RPE_BUCBP Ribulose-phosphate 3-epimeras... 126 6e-29 New sequence mark gi|2829457|sp|P56188|RPE_HELPY Ribulose-phosphate 3-epimerase... 126 8e-29 New sequence mark gi|418563|sp|P32719|ALSE_ECOLI D-allulose-6-phosphate 3-epimeras 117 3e-26 New sequence mark gi|732069|sp|P39362|SGCE_ECOLI Protein sgcE 96.7 7e-20 New sequence mark gi|51701892|sp|Q8SRP6|RPE_ENCCU Ribulose-phosphate 3-epimeras... 90.5 5e-18 New sequence mark gi|2499727|sp|P75522|RPE_MYCPN Probable ribulose-phosphate 3-... 50.1 7e-06 New sequence mark gi|1351490|sp|P47358|RPE_MYCGE Probable ribulose-phosphate 3-... 48.5 2e-05
Sequences with E-value WORSE than threshold
  gi|81883012|sp|Q5I0M2|NADC_RAT Nicotinate-nucleotide pyrophos... 37.4 0.047 Gene info   gi|11182415|sp|O74110|PYRF_THEAC Orotidine 5'-phosphate decar... 33.5 0.66   gi|76363456|sp|Q4J8X8|TRPA_SULAC Tryptophan synthase alpha chain 33.1 0.99   gi|110287683|sp|Q3T063|NADC_BOVIN Nicotinate-nucleotide pyrop... 32.7 1.0 Gene info   gi|71153612|sp|Q57FG5|THIG_BRUAB Thiazole biosynthesis protei... 32.3 1.4   gi|32130192|sp|Q8YEZ2|THIG_BRUME Thiazole biosynthesis protein t 32.3 1.4   gi|13124375|sp|O14300|OXA11_SCHPO Inner membrane protein oxa1... 32.3 1.4   gi|32130187|sp|Q8G2U9|THIG_BRUSU Thiazole biosynthesis protein t 32.3 1.4   gi|18202645|sp|Q98AZ6|THIG_RHILO Thiazole biosynthesis protein t 31.6 2.5   gi|81307794|sp|Q4ZLQ1|HIS4_PSEU2 1-(5-phosphoribosyl)-5-[(5-p... 31.2 3.6 Gene info   gi|91206941|sp|Q48C80|HIS4_PSE14 1-(5-phosphoribosyl)-5-[(5-p... 31.2 3.6 Gene info   gi|67460362|sp|Q7V364|AROC_PROMP Chorismate synthase (5-enolp... 31.2 3.6 Gene info   gi|21903445|sp|Q15274|NADC_HUMAN Nicotinate-nucleotide pyroph... 30.8 3.9 Gene info   gi|97180276|sp|Q8GU86|PDR5_ORYSA Pleiotropic drug resistance pro 30.8 4.0   gi|74671175|sp|Q4WNS8|ECM33_ASPFU Protein ecm33 precursor 30.8 4.2   gi|3041689|sp|P42405|HPS_BACSU 3-hexulose-6-phosphate synthas... 30.8 4.3   gi|60392352|sp|Q603K2|HIS4_METCA 1-(5-phosphoribosyl)-5-[(5-p... 30.8 4.4   gi|31563079|sp|Q87UG3|HIS4_PSESM 1-(5-phosphoribosyl)-5-[(5-p... 30.8 4.4   gi|1730919|sp|P52055|YPI1_VIBAL UPF0001 protein in pilT-proC int 30.8 4.6   gi|20141037|sp|Q9H4Z2|ZN335_HUMAN Zinc finger protein 335 30.8 4.6 Gene info   gi|21759297|sp|Q91X91|NADC_MOUSE Nicotinate-nucleotide pyroph... 30.4 5.1 Gene info   gi|91206942|sp|Q4KJS5|HIS4_PSEF5 1-(5-phosphoribosyl)-5-[(5-p... 30.4 5.7   gi|31563093|sp|Q88R42|HIS4_PSEPK 1-(5-phosphoribosyl)-5-[(5-p... 30.4 5.7 Gene info   gi|32130190|sp|Q8UCD2|THIG_AGRT5 Thiazole biosynthesis protein t 30.4 5.8 Gene info   gi|23822009|sp|Q8PV88|PYRF_METMA Orotidine 5'-phosphate decar... 30.4 6.0   gi|71153607|sp|Q5WH85|THIG_BACSK Thiazole biosynthesis protein t 30.0 8.1 Gene info   gi|47606188|sp|Q8P5R7|THIE_XANCP Thiamine-phosphate pyrophosp... 30.0 8.3   gi|116256185|sp|Q31JD2|THIG_THICR Thiazole biosynthesis protein 29.6 9.1 Gene info   gi|91206953|sp|Q31E65|HIS4_THICR 1-(5-phosphoribosyl)-5-[(5-p... 29.6 9.8 Gene info   gi|3043366|sp|Q48907|HPS_METAM 3-hexulose-6-phosphate synthas... 29.6 9.8   gi|23822016|sp|Q8TS37|PYRF_METAC Orotidine 5'-phosphate decar... 29.6 9.9
Alignments
>gi|1173139|sp|P46969|RPE_YEAST Gene info Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length=238 Score = 482 bits (1241), Expect = 4e-136, Method: Composition-based stats. Identities = 238/238 (100%), Positives = 238/238 (100%), Gaps = 0/238 (0%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV Sbjct 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 Query 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS Sbjct 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 Query 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHL 180 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHL Sbjct 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHL 180 Query 181 NIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDLLD 238 NIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDLLD Sbjct 181 NIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDLLD 238 >gi|51701877|sp|Q6FL81|RPE_CANGA Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length=246 Score = 407 bits (1047), Expect = 1e-113, Method: Composition-based stats. Identities = 202/240 (84%), Positives = 217/240 (90%), Gaps = 3/240 (1%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 MVKPIIAPSILASDFANLGCECH+VIN+GA+WLHIDVMDGHFVPNITLGQPIVTSLRR+V Sbjct 1 MVKPIIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAV 60 Query 61 PRPGD---ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKL 117 PR + AS +PTAFFDCHMMVE PEKWV DFAK GADQFTFHYEAT+DPL LVKL Sbjct 61 PRSQEEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYEATKDPLSLVKL 120 Query 118 IKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKF 177 IK GIKAACAIKPGT VDVLFELAP+LDMALVMTVEPGFGGQKFM DMMPKVE LR KF Sbjct 121 IKENGIKAACAIKPGTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVEALRTKF 180 Query 178 PHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDLL 237 PH+NIQVDGGLGKETI AAKAGANVIVAGTSVFTA+DPH+VISFMKEEV KEL+++ +L Sbjct 181 PHMNIQVDGGLGKETIGVAAKAGANVIVAGTSVFTASDPHEVISFMKEEVRKELKAKHIL 240 >gi|51701884|sp|Q755M2|RPE_ASHGO Gene info Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length=239 Score = 381 bits (978), Expect = 1e-105, Method: Composition-based stats. Identities = 192/238 (80%), Positives = 206/238 (86%), Gaps = 2/238 (0%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 MVKPIIAPSILASDFANL C CH+VINAGA+WLHIDVMDGHFVPNITLG PIV SLR++V Sbjct 1 MVKPIIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAV 60 Query 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 PR GD + KP AFFDCHMMV PEKWVD F + GADQFTFHYEAT++PL LVKLIKS Sbjct 61 PRVGDKES--DKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYEATKNPLELVKLIKS 118 Query 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHL 180 +GI+AACAIKP T VDVLFELAP+LDMALVMTVEPGFGGQKFM DMMPKV LR KFP L Sbjct 119 RGIRAACAIKPDTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVAALREKFPQL 178 Query 181 NIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDLLD 238 +IQVDGGLGKETIP AAKAGANVIVAGTSVF AAD DVIS+MK+ V ELRSR LLD Sbjct 179 DIQVDGGLGKETIPHAAKAGANVIVAGTSVFAAADQKDVISYMKDNVRDELRSRGLLD 236 >gi|34924986|sp|Q96AT9|RPE_HUMAN Gene info Ribulose-phosphate 3-epimerase (Ribulose-5-phosphate-3-epimerase) Length=228 Score = 259 bits (661), Expect = 7e-69, Method: Composition-based stats. Identities = 126/231 (54%), Positives = 165/231 (71%), Gaps = 11/231 (4%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 I PSIL SD ANLG EC +++++GAD+LH+DVMDGHFVPNIT G P+V SLR+ + + Sbjct 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQ--- 63 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 FFD HMMV PE+WV A GA+Q+TFH EAT++P L+K I+ G+K Sbjct 64 --------DPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKV 115 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQVD 185 AIKPGTSV+ L A +DMALVMTVEPGFGGQKFMEDMMPKV LR +FP L+I+VD Sbjct 116 GLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVD 175 Query 186 GGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDL 236 GG+G +T+ K A+AGAN+IV+G+++ + DP VI+ ++ S+ + R L Sbjct 176 GGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSL 226 >gi|34924979|sp|Q8VEE0|RPE_MOUSE Gene info Ribulose-phosphate 3-epimerase (Ribulose-5-phosphate-epimerase) Length=228 Score = 257 bits (657), Expect = 2e-68, Method: Composition-based stats. Identities = 125/231 (54%), Positives = 165/231 (71%), Gaps = 11/231 (4%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 I PSIL SD ANLG EC +++++GAD+LH+DVMDGHFVPNIT G P+V SLR+ + + Sbjct 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQ--- 63 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 FFD HMMV PE+WV A GA+Q+TFH EAT++P L+K I+ G+K Sbjct 64 --------DPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKV 115 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQVD 185 AIKPGT+V+ L A +DMALVMTVEPGFGGQKFMEDMMPKV LR +FP L+I+VD Sbjct 116 GLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPTLDIEVD 175 Query 186 GGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDL 236 GG+G +T+ K A+AGAN+IV+G+++ + DP VI+ ++ S+ + R L Sbjct 176 GGVGPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRNVCSEAAQKRSL 226 >gi|75061668|sp|Q5R5Y2|RPE_PONPY Ribulose-phosphate 3-epimerase (Ribulose-5-phosphate-3-epimerase) Length=228 Score = 257 bits (656), Expect = 3e-68, Method: Composition-based stats. Identities = 125/231 (54%), Positives = 164/231 (70%), Gaps = 11/231 (4%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 I PSIL SD ANLG EC +++++GAD+LH+DVMDGHFVPNIT G P+V SLR+ + + Sbjct 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQ--- 63 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 FFD HMMV PE+WV A GA+Q+ FH EAT++P L+K I+ G+K Sbjct 64 --------DPFFDMHMMVSKPEQWVKPMAVAGANQYAFHLEATENPGALIKDIRENGMKV 115 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQVD 185 AIKPGTSV+ L A +DMALVMTVEPGFGGQKFMEDMMPKV LR +FP L+I+VD Sbjct 116 GLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVD 175 Query 186 GGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDL 236 GG+G +T+ K A+AGAN+IV+G+++ + DP VI+ ++ S+ + R L Sbjct 176 GGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSL 226 >gi|60390595|sp|Q9SE42|RPE1_ORYSA Ribulose-phosphate 3-epimerase, cytoplasmic isoform (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) Length=228 Score = 230 bits (587), Expect = 3e-60, Method: Composition-based stats. Identities = 116/226 (51%), Positives = 157/226 (69%), Gaps = 17/226 (7%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 IAPS+L+SDFANL E +++ GADWLH+D+MDGHFVPN+T+G P++ SLR Sbjct 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR-------- 60 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLH-LVKLIKSKGIK 124 K A+ DCH+MV NP +V+ AK GA FTFH E ++D L++ IK+KG++ Sbjct 61 -----KHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMR 115 Query 125 AACAIKPGTSVDVLFELAPH---LDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLN 181 +++PGT V+ +F L +++ LVMTVEPGFGGQKFM +MM KV LR K+P L+ Sbjct 116 PGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLD 175 Query 182 IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEV 227 I+VDGGLG TI AA AGAN IVAG+S+F AA+P +VIS +++ V Sbjct 176 IEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSV 221 >gi|51701874|sp|O14105|RPE_SCHPO Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length=228 Score = 229 bits (584), Expect = 6e-60, Method: Composition-based stats. Identities = 116/234 (49%), Positives = 152/234 (64%), Gaps = 10/234 (4%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 MV+ IAPS+LA DFANL E +++ G+DWLH+DVMD FVPN+T+G +V ++R Sbjct 1 MVQAKIAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMR--- 57 Query 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 N K AFFDCH+MV PE+++D A GA F FHYEAT+ ++ Sbjct 58 -------NHYTKEEAFFDCHLMVIEPERYIDQLADAGASLFCFHYEATEKHEEIISRAHE 110 Query 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHL 180 KG+ CA+KP T V+V+ LDM LVMTVEPG GGQ FM + +PKVE LR K+P L Sbjct 111 KGMLVGCALKPKTPVEVILPFVEKLDMVLVMTVEPGKGGQSFMPECLPKVEFLRKKYPTL 170 Query 181 NIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSR 234 N++VDGGL +T+ AA AGANVIVAGT+VF A P +VIS ++ V K ++ Sbjct 171 NVEVDGGLSLKTVDAAADAGANVIVAGTAVFHAQSPEEVISGLRNSVMKAQETK 224 >gi|18203210|sp|Q9L0Z5|RPE_STRCO Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=228 Score = 196 bits (498), Expect = 7e-50, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 142/225 (63%), Gaps = 19/225 (8%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 I PSIL++DFA L E V GADWLH+DVMD HFVPN+TLG P+V SL R+ P Sbjct 5 INPSILSADFARLADEAKAV--EGADWLHVDVMDNHFVPNLTLGVPVVESLARATDTP-- 60 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 DCH+M+E P++W + + GA TFH EA P+ L + I++KG +A Sbjct 61 -----------LDCHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARA 109 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKV----ETLRAKFPHLN 181 + A+KP T V+ +L P LDM L+MTVEPGFGGQ F++ M+PK+ E ++ L Sbjct 110 SMALKPATPVEPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELIKKHGLELW 169 Query 182 IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEE 226 +QVDGG+ TI + A AGA+V VAG++V+ A+DP + + ++ + Sbjct 170 LQVDGGVSAATIERCADAGADVFVAGSAVYGASDPAEAVRALRTQ 214 >gi|54039256|sp|P65761|RPE_MYCBO Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) gi|54041952|sp|P65760|RPE_MYCTU Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=229 Score = 186 bits (471), Expect = 7e-47, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 138/212 (65%), Gaps = 19/212 (8%) Query 4 PIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRP 63 P+IAPSILA+DFA L E V GADWLH+DVMDGHFVPN+T+G P+V SL P Sbjct 8 PLIAPSILAADFARLADEAAAV--NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIP 65 Query 64 GDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGI 123 DCH+M++NP++W +A+ GA TFH EAT +P+ + + I++ G Sbjct 66 -------------MDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGA 112 Query 124 KAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLR----AKFPH 179 KA ++KPGT ++ ++ PH D LVM+VEPGFGGQ+F+ +++ KV +R A Sbjct 113 KAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELT 172 Query 180 LNIQVDGGLGKETIPKAAKAGANVIVAGTSVF 211 + +++DGG+ +TI +AA+AG + VAG++V+ Sbjct 173 ILVEIDGGINDDTIEQAAEAGVDCFVAGSAVY 204 >gi|17380276|sp|Q9CCP9|RPE_MYCLE Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=224 Score = 182 bits (462), Expect = 1e-45, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 137/212 (64%), Gaps = 19/212 (8%) Query 4 PIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRP 63 P+IAPSILA+DFA L E V A ADWLH+DVMDGHFVPN+T+G P+V SL + P Sbjct 3 PLIAPSILAADFARLTDEAAVV--ASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIP 60 Query 64 GDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGI 123 DCH+M++NP++W +A+ GA TFH EAT +P+ + I++ G Sbjct 61 -------------MDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVAHDIRTAGA 107 Query 124 KAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLR----AKFPH 179 KA +KPGT ++ ++ PH D L+M+VEPGFGGQ F+ +++ KV T+R A Sbjct 108 KAGIGVKPGTPLNPYLDILPHFDTLLIMSVEPGFGGQAFIPEVLSKVRTVRKMVDAGELT 167 Query 180 LNIQVDGGLGKETIPKAAKAGANVIVAGTSVF 211 + +++DGG+ +TI +AA+AG + VAG++V+ Sbjct 168 ILVEIDGGINADTIEQAAEAGVDCFVAGSAVY 199 >gi|6647758|sp|O34557|RPE_BACSU Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=217 Score = 171 bits (434), Expect = 2e-42, Method: Composition-based stats. Identities = 95/224 (42%), Positives = 136/224 (60%), Gaps = 18/224 (8%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 +APSIL++DFA LG E V GAD +HIDVMDGHFVPNIT+G IV ++R P Sbjct 4 VAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP-- 61 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 D H+M+E P++++ FAK GAD + H EA ++LIK +G+KA Sbjct 62 -----------LDVHLMIEEPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGVKA 110 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPH-----L 180 + P T V V+ + LD+ L+MTV PGFGGQKF+ ++PK++ ++ L Sbjct 111 GVVLNPHTPVQVIEHVFDDLDLVLLMTVNPGFGGQKFIHSVLPKIKEVKRMADEKGKKDL 170 Query 181 NIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMK 224 I+VDGG+ KET P +AGAN++VAG++V+ +D IS ++ Sbjct 171 LIEVDGGVNKETAPLVIEAGANLLVAGSAVYGQSDRKKAISEIR 214 >gi|2829613|sp|P74061|RPE_SYNY3 Gene info Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=230 Score = 163 bits (413), Expect = 4e-40, Method: Composition-based stats. Identities = 94/233 (40%), Positives = 133/233 (57%), Gaps = 21/233 (9%) Query 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 ++APSIL++DF+ LG E V AGADW+H+DVMDG FVPNIT+G IV ++R + Sbjct 6 VVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKT- 64 Query 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKL---IKSK 121 D H+M+ PEK+V+DFAK GAD + H E P HL + I+ Sbjct 65 ------------LDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASP-HLHRTLCQIREL 111 Query 122 GIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLN 181 G KA + P T +D L + P D+ L+M+V PGFGGQ F+ +++PK+ LR Sbjct 112 GKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERG 171 Query 182 ----IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKE 230 I+VDGGL + +AGAN IVAG++VF A + + I+ ++ E Sbjct 172 LDPWIEVDGGLKPNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNSKRPE 224 >gi|6226024|sp|O67098|RPE_AQUAE Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=222 Score = 159 bits (402), Expect = 9e-39, Method: Composition-based stats. Identities = 82/215 (38%), Positives = 123/215 (57%), Gaps = 17/215 (7%) Query 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 ++APSILA D+ +G + I GAD LH DVMDGHFVPNIT G I++ +R+ P Sbjct 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPI 62 Query 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIK 124 DA H+M+ENP+K++ F + GA+ + H E ++LIK G K Sbjct 63 DA-------------HLMIENPDKYIPKFVEAGANWISVHIENNYHIHRTLQLIKELGAK 109 Query 125 AACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLN--- 181 A + PGTS+ + E + D L+M+V PGF GQKF+E + ++ L+ +N Sbjct 110 AGVVVNPGTSLSAIEEALYYADYVLLMSVNPGFSGQKFIERSIERLRILKEMRDRINPSC 169 Query 182 -IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 I++DGG+ + I + +AGA+V+V G+ +F A D Sbjct 170 LIEIDGGIKENNIAEVVRAGADVVVVGSGIFGAKD 204 >gi|2499728|sp|Q43843|RPE_SOLTU Ribulose-phosphate 3-epimerase, chloroplast precursor (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length=280 Score = 157 bits (396), Expect = 5e-38, Method: Composition-based stats. Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 21/227 (9%) Query 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 I++PSIL+++F+ LG + + AG DW+H+DVMDG FVPNIT+G +V SLR P Sbjct 58 IVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLP- 116 Query 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHL---VKLIKSK 121 D H+M+ P++ V DF K GAD + H E + +HL + IKS Sbjct 117 ------------LDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSS-TIHLHRTINQIKSL 163 Query 122 GIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPH-- 179 G KA + PGT + + + +D+ L+M+V PGFGGQ F+E + K+ LR Sbjct 164 GAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERG 223 Query 180 LN--IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMK 224 LN I+VDGG+G + K +AGAN +VAG++VF A D + I +K Sbjct 224 LNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIK 270 >gi|6647759|sp|O66107|RPE_TREPA Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=218 Score = 156 bits (395), Expect = 6e-38, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 19/213 (8%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 +APS+L++DF+ L + GA W+H+DVMDGHFVPN+T G P++ LR P Sbjct 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLP-- 64 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 FD H+MV P ++DF + GAD TFH EA L+ I+ +G+K Sbjct 65 -----------FDVHLMVSRPADLIEDFVQAGADFLTFHIEAEVHAHRLIHAIRGRGVKV 113 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETL-----RAKFPHL 180 ++ P T V L E+ P +D+ LVMTV PGF GQ+ + + KV L + ++ Sbjct 114 GISLVPSTPVAALSEVLPFVDLVLVMTVNPGFSGQQMIAHCLSKVSALVQMRTERGYSYM 173 Query 181 NIQVDGGLGKETIPKAAKAGANVIVAGTSVFTA 213 I VDGG+ T+P+A AGA+VIV+G++ F+ Sbjct 174 -ISVDGGIDCRTLPQALDAGADVIVSGSAFFSG 205 >gi|6094119|sp|P51012|RPE_RHOCA Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=228 Score = 155 bits (393), Expect = 1e-37, Method: Composition-based stats. Identities = 87/208 (41%), Positives = 122/208 (58%), Gaps = 16/208 (7%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 IAPSIL++DFA+ G E + GADW+H+DVMDGHFVPN+T G P V + R+ V Sbjct 9 IAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHV----- 63 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 D H+M+ + ++D +A+ GAD T H EA ++ I++ G+K+ Sbjct 64 --------KTVMDVHLMISPVDAYIDAYAQAGADVLTAHVEAGPHIHRTLQAIRAAGMKS 115 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPH--LNIQ 183 AI PGT + + + D+ VMTV PGFGGQK++ DM KV LRA ++I+ Sbjct 116 GVAINPGTPAEAIEHVLDIADVVCVMTVNPGFGGQKYI-DMTAKVRKLRAMIGDRPVHIE 174 Query 184 VDGGLGKETIPKAAKAGANVIVAGTSVF 211 +DGG+ T P A AGA+V VAG+ VF Sbjct 175 IDGGMDPVTAPLMAAAGADVFVAGSGVF 202 >gi|84028110|sp|P0AG09|RPE_ECO57 Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) gi|84028150|sp|P0AG08|RPE_ECOL6 Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) gi|84028157|sp|P0AG07|RPE_ECOLI Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) gi|84028158|sp|P0AG10|RPE_SHIFL Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=225 Score = 154 bits (389), Expect = 3e-37, Method: Composition-based stats. Identities = 90/233 (38%), Positives = 133/233 (57%), Gaps = 16/233 (6%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 M + +IAPSIL++DFA LG + K + AGAD +H DVMD H+VPN+T+G ++ SLR Sbjct 1 MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLR--- 57 Query 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 TA D H+MV+ ++ V DFA GA TFH EA++ ++LIK Sbjct 58 ---------NYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKE 108 Query 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPH- 179 G KA P T + L + LD+ L+M+V PGFGGQ F+ + K+ +R + Sbjct 109 NGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDES 168 Query 180 ---LNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSK 229 + ++VDGG+ I + A AGA++ VAG+++F D VI M+ E++K Sbjct 169 GFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAK 221 >gi|25091192|sp|Q8K940|RPE_BUCAP Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=228 Score = 153 bits (386), Expect = 6e-37, Method: Composition-based stats. Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 22/222 (9%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRR-- 58 M K +A SIL++DFA LG + K I+AG+DW+H DVMD H+VPN+T+G I+ +LR Sbjct 1 MKKFFLASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYN 60 Query 59 -SVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKL 117 +VP D H+MV+ + + FA+ GAD TFH E+T + L Sbjct 61 ITVP---------------IDVHLMVKPVDNLIPQFAEAGADFITFHPESTDHIDRTLNL 105 Query 118 IKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKF 177 IK G KA A+ P TS++ L + LD+ L+M+V PGFG Q F+ K+ +R K Sbjct 106 IKECGCKAGLALNPATSLNFLDYVMEKLDLILLMSVNPGFGNQSFLPTSFNKLREVRKKI 165 Query 178 ----PHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 ++ ++VDGG+ E I + A +GANV V G+ +F D Sbjct 166 ELNSSNILLEVDGGVKLENISEVAFSGANVFVIGSGIFGYTD 207 >gi|2833386|sp|Q43157|RPE_SPIOL Ribulose-phosphate 3-epimerase, chloroplast precursor (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length=285 Score = 152 bits (385), Expect = 7e-37, Method: Composition-based stats. Identities = 93/226 (41%), Positives = 129/226 (57%), Gaps = 19/226 (8%) Query 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 I++PSIL+++FA LG + V AG DW+H+DVMDG FVPNIT+G +V +LR P Sbjct 63 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP- 121 Query 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYE-ATQDPLH-LVKLIKSKG 122 D H+M+ PE+ V DF K GAD + H E A+ LH V IKS G Sbjct 122 ------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLG 169 Query 123 IKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRA----KFP 178 KA + PGT + + + +D+ L+M+V PGFGGQ F+E + K+ LR K Sbjct 170 AKAGVVLNPGTPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGV 229 Query 179 HLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMK 224 + I+VDGG+ K +AGAN +VAG++VF A D + I +K Sbjct 230 NPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 275 >gi|109940150|sp|Q9ZTP5|RPE_ORYSA Ribulose-phosphate 3-epimerase, chloroplast precursor (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length=274 Score = 152 bits (383), Expect = 1e-36, Method: Composition-based stats. Identities = 92/227 (40%), Positives = 130/227 (57%), Gaps = 21/227 (9%) Query 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 I++PSIL+++F+ LG + V AG DW+H+DVMDG FVPNIT+G +V +LR P Sbjct 52 IVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP- 110 Query 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHL---VKLIKSK 121 D H+M+ PE+ V DF K GAD + H E + +HL V IKS Sbjct 111 ------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSST-IHLHRTVNQIKSL 157 Query 122 GIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLR----AKF 177 G KA + P T + + + +D+ L+M+V PGFGGQ F+E + K+ LR K Sbjct 158 GAKAGVVLNPATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRLCAEKG 217 Query 178 PHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMK 224 + I+VDGG+G + K +AGAN IVAG++VF A D + I +K Sbjct 218 VNPWIEVDGGVGPKNAYKVIEAGANAIVAGSAVFGAPDYAEAIKGIK 264 >gi|11387063|sp|P57603|RPE_BUCAI Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=228 Score = 151 bits (382), Expect = 2e-36, Method: Composition-based stats. Identities = 93/235 (39%), Positives = 131/235 (55%), Gaps = 20/235 (8%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 M K +APSIL++DFA LG + KVI+AG+D +H DVMD H+VPN+++G I+ SLR Sbjct 1 MNKFFLAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLR--- 57 Query 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 TA D H+MV+ + + FAK GA TFH EAT + LIK Sbjct 58 ---------NYNITAPIDVHLMVKPVDNLIPQFAKAGATFITFHPEATLHIERTLNLIKE 108 Query 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLR----AK 176 G KA A P T ++ L + LD+ L+M+V PGFG Q F+ K+ +R A Sbjct 109 NGCKAGLAFNPATPLNFLDYILEKLDLILLMSVNPGFGNQSFLPSTFNKLREVRKIIDAN 168 Query 177 FPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKEL 231 F + ++VDGG+ + I A AGANV V G+ +F ++ VI E++ K+L Sbjct 169 FSDILLEVDGGVKLDNIADIACAGANVFVMGSGLFKYSNYKLVI----EKIRKKL 219 >gi|6226025|sp|Q9Z8Z9|RPE_CHLPN Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=229 Score = 151 bits (382), Expect = 2e-36, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 122/215 (56%), Gaps = 19/215 (8%) Query 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 ++ PSI+ +D LG E K+ AG+D++HID+MDGHFVPN+T G I+ ++ RS Sbjct 8 LVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRST---- 63 Query 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIK 124 F + H M+ NP ++++ F + GAD+ H+EA++D L+ IK G++ Sbjct 64 ---------DLFLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQ 114 Query 125 AACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLN--- 181 A A P TS++ L P D+ ++M+V PGF GQ F+ + + K+ R L Sbjct 115 AGLAFSPDTSIEFLPSFLPFCDVVVLMSVYPGFTGQSFLPNTIEKIAFARHAIKTLGLKD 174 Query 182 ---IQVDGGLGKETIPKAAKAGANVIVAGTSVFTA 213 I+VDGG+ +++ P AGA+++V + +F A Sbjct 175 SCLIEVDGGIDQQSAPLCRDAGADILVTASYLFEA 209 >gi|6226026|sp|O84123|RPE_CHLTR Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=233 Score = 149 bits (377), Expect = 6e-36, Method: Composition-based stats. Identities = 82/229 (35%), Positives = 130/229 (56%), Gaps = 24/229 (10%) Query 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 ++APSI+ +D A +G E + +GAD +HIDVMDGHFVPNIT G +V ++ RS Sbjct 12 LVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINRST---- 67 Query 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIK 124 F + H M+ P ++V+ F K GAD+ H+EA ++ ++ I+ G++ Sbjct 68 ---------ELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIISYIQKCGVQ 118 Query 125 AACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLN--- 181 A A P TS++ + P D+ L+M+V PGF GQKF+ D + +++ ++ L Sbjct 119 AGVAFSPETSIEFVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREG 178 Query 182 ---IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEV 227 I+VDGG+ KE+ +AGA+++VA + F D I+ MKE+V Sbjct 179 SCLIEVDGGIDKESARACREAGADILVAASYFFE----KDSIN-MKEKV 222 >gi|14195180|sp|Q9PKR7|RPE_CHLMU Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=228 Score = 147 bits (372), Expect = 3e-35, Method: Composition-based stats. Identities = 83/229 (36%), Positives = 129/229 (56%), Gaps = 24/229 (10%) Query 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 +IAPSI+ +D A LG + +GA+ +HIDVMDGHFVPNIT G I+ ++ RS Sbjct 7 LIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRST---- 62 Query 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIK 124 F + H M+ P ++V+ F K GAD+ H+EA ++ ++ I+ G++ Sbjct 63 ---------DLFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENLKEILDYIRKCGVQ 113 Query 125 AACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLN--- 181 A A P TS++ + P D+ L+M+V+PGF GQKF+ D + K+ +R L Sbjct 114 AGIAFSPETSIEFISAFIPLCDVILLMSVQPGFCGQKFIPDTIEKIRFVRQAIQTLGKEG 173 Query 182 ---IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEV 227 I+VDGG+ +E+ +AGA+++VA + F D I+ MKE+V Sbjct 174 SCLIEVDGGIDEESARACREAGADILVAASYFFK----KDSIN-MKEKV 217 >gi|1169389|sp|P45455|RPE_SERMA Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=210 Score = 144 bits (363), Expect = 3e-34, Method: Composition-based stats. Identities = 83/219 (37%), Positives = 124/219 (56%), Gaps = 16/219 (7%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 M K +IAPSIL++DFA LG + V+ AG D +H DVMD H+VPN+T+G + +LR Sbjct 1 MKKFLIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALR--- 57 Query 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 TA D H+MV+ ++ V DFAK GA +FH EA++ ++LIK Sbjct 58 ---------NYGITAPIDVHLMVKPVDRIVPDFAKAGASYISFHPEASEHVDRTIQLIKE 108 Query 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFP-- 178 G KA P T + L + +D+ L+M+V PGFGGQ F+ + K+ +R Sbjct 109 HGCKAGLVFNPATPLSYLDYVMDKIDVILLMSVNPGFGGQSFIHGTLDKLRQVRKLIDDS 168 Query 179 --HLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 + ++VDGG+ + I + A AGA++ VAG+++F D Sbjct 169 GRDIRLEVDGGVKVDNIAEIAAAGADMFVAGSAIFGQPD 207 >gi|1169388|sp|P44756|RPE_HAEIN Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=224 Score = 144 bits (362), Expect = 4e-34, Method: Composition-based stats. Identities = 82/232 (35%), Positives = 133/232 (57%), Gaps = 17/232 (7%) Query 2 VKP-IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 +KP +IAPSIL++D A LG + V+NAGAD +H DVMD H+VPN+T G + +LR Sbjct 1 MKPYLIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALR--- 57 Query 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 + TA D H+MV+ ++ + DFAK GA+ TFH E+++ ++LI+ Sbjct 58 ---------DYGITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRD 108 Query 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPH- 179 G K+ P + L + +D+ L+M+V PGFGGQ F+ + K++ R Sbjct 109 CGCKSGLVFNPAMPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDES 168 Query 180 ---LNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVS 228 + ++VDGG+ + I + A AGA++ VAG+++F D VI ++ +++ Sbjct 169 GYDIRLEVDGGVKVDNIAEIAAAGADMFVAGSAIFGKPDYKQVIDQIRTQLA 220 >gi|2833527|sp|Q58093|RPE_METJA Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=234 Score = 143 bits (360), Expect = 7e-34, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 20/236 (8%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 I SIL++DF +L E K AG D+ H+D+MDGHFVPNI++G I +++ P Sbjct 4 IGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELP-- 61 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 + H+MVEN + +V++F + D TFH EA + P ++ IKS G K Sbjct 62 -----------VEVHLMVENVDLFVNEFEE--MDYITFHIEAVKFPFRIINRIKSIGAKP 108 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPH----LN 181 A+ P T +D + + + LVMTVEPGF GQKF+ M K+ L++ Sbjct 109 IVALNPATPLDAIEYILGDVYAVLVMTVEPGFSGQKFIPVMTKKIRKLKSMIVENGYDTK 168 Query 182 IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDLL 237 I VDGG+ ET P A KAGA+V+VA +++F D + ++E + L ++D L Sbjct 169 IFVDGGINVETAPLAVKAGADVLVAASAIFGKDDVKTAVKNLREAALEAL-NKDFL 223 >gi|729235|sp|P40117|RPEC_RALEH Ribulose-phosphate 3-epimerase, chromosomal (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=241 Score = 140 bits (353), Expect = 4e-33, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 120/218 (55%), Gaps = 21/218 (9%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 +APSIL++DFA LG E + GAD +H DVMD H+VPN+T+G + ++R V P Sbjct 18 LAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPLVSIP-- 75 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 D H+MVE + + FAK GA+ +FH EA++ + LI+ G KA Sbjct 76 -----------IDVHLMVEPVDALIPLFAKAGANIISFHPEASRHVDRTIGLIRDHGCKA 124 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPH------ 179 + P T + L LD+ L+M+V PGFGGQ F+ ++ KV RA+ Sbjct 125 GLVLNPATPLGWLDHTLDQLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVDAGG 184 Query 180 --LNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 + +++DGG+ + I A+AGA+ VAG++VF A D Sbjct 185 RPVWLEIDGGVKADNIAAIARAGADTFVAGSAVFGAPD 222 >gi|729236|sp|Q04539|RPEP_RALEH Ribulose-phosphate 3-epimerase, plasmid (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=241 Score = 137 bits (346), Expect = 3e-32, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 21/218 (9%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 +APSIL++DFA LG E + GAD +H DVMD H+V N+T+G + ++R V P Sbjct 18 LAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPLVSIP-- 75 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 D H+MVE + + FAK GA+ +FH EA++ + LI+ G KA Sbjct 76 -----------IDVHLMVEPVDALIPMFAKAGANLISFHPEASRHVDRTIGLIRDHGCKA 124 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPH------ 179 + P T + L LD+ L+M+V PGFGGQ F+ ++ KV RA+ Sbjct 125 GLVLNPATPLSWLDHTLDKLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVAAGG 184 Query 180 --LNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 + +++DGG+ + I + A+AGA+ VAG++VF A D Sbjct 185 RPVWLEIDGGVKADNITEIARAGADTFVAGSAVFGAPD 222 >gi|6647760|sp|Q9ZJ75|RPE_HELPJ Gene info Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=217 Score = 130 bits (326), Expect = 5e-30, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 19/214 (8%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 +APS+L++DF +L E V NA D+LH+DVMDGH+VPN+T+G I+ ++ + P Sbjct 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVILENVTQMSQVP-- 58 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 D H+MVEN +V+ FA + H E + P +++LIKS GI Sbjct 59 -----------LDVHLMVENASFFVELFAPLNPQIISIHAENEKHPHRVLQLIKSSGITP 107 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKV----ETLRAKFPHLN 181 + P T + + L + + L+M+V PGFGGQKF++ ++ K E ++ P Sbjct 108 GIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCL 167 Query 182 IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 ++VDGG+ + I + +AG +V+V+G+ +F + D Sbjct 168 LEVDGGVNDKNIFELQQAGVDVVVSGSYIFESKD 201 >gi|2851605|sp|P51013|RPE_RHORU Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=225 Score = 128 bits (321), Expect = 2e-29, Method: Composition-based stats. Identities = 76/221 (34%), Positives = 118/221 (53%), Gaps = 16/221 (7%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 IAPS+L++DFA C GAD LH DVMD H+VPN+T+G + +LR P Sbjct 7 IAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLP-- 64 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 D H+M + +D FA+ GAD TFH EA+ V++I+ +G+KA Sbjct 65 -----------IDVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKA 113 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLR--AKFPHLNIQ 183 A+ P + + +L + LD+ L+M+V PGFGGQ F+ +PK+ L + + Sbjct 114 GVALNPASPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALANGRRRACRGDR 173 Query 184 VDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMK 224 VDGG+ A+ GA+++V ++F A+D I+ ++ Sbjct 174 VDGGVNPADARALARPGADILVR-LAIFGASDRAKAIASIR 213 >gi|46396626|sp|Q89A59|RPE_BUCBP Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=228 Score = 126 bits (317), Expect = 6e-29, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 121/217 (55%), Gaps = 14/217 (6%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 M K +++ S+L+++F+ LG + V+ +G+D +H DVMD H+V N+T G ++ SLR Sbjct 1 MKKFLLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLR--- 57 Query 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 + EK + D H+M + + FAK + +FH E+T + +KLIKS Sbjct 58 -------SVEKIKSMVIDVHLMTCPVDDLIIKFAKLDVNIISFHPESTNNVEKTIKLIKS 110 Query 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKF--- 177 G K A+ P T + VL + +D+ L+M+V PGF GQKF+ ++ K+ +R Sbjct 111 YGCKVGLALNPLTPLCVLDNVLDKIDLILLMSVNPGFPGQKFIPSILNKIRIVRELIDKS 170 Query 178 -PHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTA 213 ++ ++VDGG+ I K A G ++ V G+++F + Sbjct 171 KKNILLEVDGGINLSNIFKIASFGTDIFVIGSAIFNS 207 >gi|2829457|sp|P56188|RPE_HELPY Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=217 Score = 126 bits (316), Expect = 8e-29, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 19/214 (8%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 +APS+L++DF +L E V NA D+LH+DVMDGH+VPN+T+G P+V Sbjct 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMG-PVVLE---------- 49 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125 N + D H+MVEN + + FA + H E + P +++LIK+ GI Sbjct 50 --NVTQMSQVPLDVHLMVENASFFAELFAPLKPQIISIHAENEKHPHRVLQLIKNLGITP 107 Query 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKV----ETLRAKFPHLN 181 + P T + + L + + L+M+V PGFGGQKF++ ++ K E ++ P Sbjct 108 GIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCL 167 Query 182 IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 ++VDGG+ + I + +AG +V+V+G+ +F + D Sbjct 168 LEVDGGVNDKNIFELQQAGVDVVVSGSYIFKSKD 201 >gi|418563|sp|P32719|ALSE_ECOLI D-allulose-6-phosphate 3-epimerase Length=231 Score = 117 bits (293), Expect = 3e-26, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 19/209 (9%) Query 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65 I+PS++ D E + I++ AD+ HID+MDGHFVPN+TL V+ +++ +P Sbjct 3 ISPSLMCMDLLKFK-EQIEFIDSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKP-- 59 Query 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQ-DPLHLVKLIKSKGIK 124 DCH+MV P+ ++ A+ GAD T H E L+ I+ +K Sbjct 60 -----------LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMK 108 Query 125 AACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRA----KFPHL 180 + P T V+ + D VMTV+PGF GQ F+ +M+ K+ L+A + Sbjct 109 VGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEY 168 Query 181 NIQVDGGLGKETIPKAAKAGANVIVAGTS 209 I+VDG + T K AGA+V + GTS Sbjct 169 EIEVDGSCNQATYEKLMAAGADVFIVGTS 197 >gi|732069|sp|P39362|SGCE_ECOLI Protein sgcE Length=210 Score = 96.7 bits (239), Expect = 7e-20, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 13/211 (6%) Query 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 I+ PS+ +++ + G E + N LH+D+ D F+ NIT G V ++ R P P Sbjct 2 ILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP- 60 Query 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIK 124 H M+ P++W + A+ H E P + I+ G + Sbjct 61 ------------LSFHFMLARPQRWFNALAEIRPAWIFVHAETLDYPSETLTEIRHTGAR 108 Query 125 AACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQV 184 A P T +D LA LD +VMT EP GQ+F+ M K++ +R FP Sbjct 109 AGLVFNPATPIDAWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQTECWA 168 Query 185 DGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 DGG+ + A AGA +V G ++F+++D Sbjct 169 DGGITLAAAQQLAAAGAQHMVIGRALFSSSD 199 >gi|51701892|sp|Q8SRP6|RPE_ENCCU Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length=217 Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 21/215 (9%) Query 1 MVKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSV 60 M+K I SIL +F NL E ++ G +H+DVMD FV NIT G I+ + Sbjct 5 MLKKRIGISILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILEH- 63 Query 61 PRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKS 120 FD HMMVE+P + T H E D + + ++ Sbjct 64 -------------DFVFDVHMMVESPLDIIMQIDLERVSLVTIHSEVC-DKAGVAEYLRK 109 Query 121 KGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHL 180 + + A+ P T VD E+ D L+M+V+PGFGGQKF E+ + KVE +R ++ + Sbjct 110 RNVLFGIALNPETQVDDA-EMRS-ADFVLIMSVKPGFGGQKFQEECLAKVEEVR-RYGKM 166 Query 181 NIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 + +DGG+ I + GA+ V G+ F + D Sbjct 167 -VGIDGGIEMSNIGRI--TGADYAVVGSGYFRSGD 198 >gi|2499727|sp|P75522|RPE_MYCPN Probable ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=215 Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 21/183 (11%) Query 29 GADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEK 88 G +H DVMD HFV N G+ + ++ + H+MV+ E+ Sbjct 33 GLRLIHYDVMD-HFVDNTVF--------------QGEHLDELQQIGFQVNVHLMVQALEQ 77 Query 89 WVDDFAKCGA-DQFTFHYEATQDPL--HLVKLIKSKGIKAACAIKPGTSVDVLFELAPHL 145 + + A + +FH E P H + IK G + A K T + L L Sbjct 78 ILPVYLHHQAVKRISFHVEPFDIPTIKHFIAQIKQAGKQVGLAFKFTTPLVNYERLVQQL 137 Query 146 DMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIV 205 D +M+V PG GGQ F + ++ +A H +I++DGG+ + I + + N IV Sbjct 138 DFVTLMSVPPGKGGQAFNSAVFNNLK--QAHKYHCSIEIDGGIKLDNIHQ-IQDDVNFIV 194 Query 206 AGT 208 G+ Sbjct 195 MGS 197 >gi|1351490|sp|P47358|RPE_MYCGE Probable ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length=209 Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 25/185 (13%) Query 29 GADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDC--HMMVENP 86 G +H DVMD FV N + L+ T FD H+MVE Sbjct 28 GLRLIHYDVMD-QFVHNTAFKGEYLDELK----------------TIGFDVNVHLMVEQI 70 Query 87 EKWVDDF-AKCGADQFTFHYE--ATQDPLHLVKLIKSKGIKAACAIKPGTSVDVLFELAP 143 ++ + ++ + +FH E + L++L+K G + A K T++ + Sbjct 71 IPQINFYLSQPNVKRISFHVEPFSFAKIKELIQLVKENGKEVGLAFKFTTNLQLYQPFFT 130 Query 144 HLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANV 203 +D +M+V PG GGQ F E + ++ A +L I++DGG+ I + KA + Sbjct 131 TIDFITLMSVPPGKGGQAFNEAVFTNLKI--ANHYNLKIEIDGGIKVNNIDQ-IKAFVDF 187 Query 204 IVAGT 208 IV G+ Sbjct 188 IVMGS 192 >gi|81883012|sp|Q5I0M2|NADC_RAT Gene info Nicotinate-nucleotide pyrophosphorylase [carboxylating] (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase) (QPRTase) Length=299 Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query 164 EDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADP 216 E++ P TL+AKFP+++++ GG+ + +P+ G N+ V + T A P Sbjct 227 EELHPTAATLKAKFPNVSVEASGGVTLDNLPQF--CGTNIDVISLGMLTQAAP 277 >gi|11182415|sp|O74110|PYRF_THEAC Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) Length=214 Score = 33.5 bits (75), Expect = 0.66, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 0/34 (0%) Query 196 AAKAGANVIVAGTSVFTAADPHDVISFMKEEVSK 229 A KAGA++++ G S++ +ADP + EE++K Sbjct 176 AIKAGADLVIVGRSIYESADPVTAAEAINEEIAK 209 >gi|76363456|sp|Q4J8X8|TRPA_SULAC Tryptophan synthase alpha chain Length=245 Score = 33.1 bits (74), Expect = 0.99, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 9/121 (7%) Query 115 VKLIKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGG--QKFMEDMMPKVET 172 V LIK++GIK P D++ + + D+ L V P G ++ ++ ++ T Sbjct 125 VNLIKNEGIKTVLFTAPLMPDDLIIKASKLTDLFLYYGVRPTTGVVIPISIDSLINRIRT 184 Query 173 LRAKFPHLNIQVDGGLGK-ETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKEL 231 + + V GL E I KA GA+ I GTS+ D + V + E+ K+L Sbjct 185 MVQS----KLVVGFGLNSIEDIKKAMSVGADGIAVGTSLIEEVDKNGVNGAL--ELIKKL 238 Query 232 R 232 R Sbjct 239 R 239 >gi|110287683|sp|Q3T063|NADC_BOVIN Gene info Nicotinate-nucleotide pyrophosphorylase [carboxylating] (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase) (QPRTase) Length=299 Score = 32.7 bits (73), Expect = 1.0, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query 164 EDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADP 216 E++ P TL+A+FP ++++ GG+ + +P+ +VI G + T A P Sbjct 227 EELHPTAATLKAQFPSVSVEASGGVRLDNLPQFCGPHIDVISLG--MLTQAAP 277 >gi|71153612|sp|Q57FG5|THIG_BRUAB Thiazole biosynthesis protein thiG gi|115305845|sp|Q2YP58|THIG_BRUA2 Thiazole biosynthesis protein thiG Length=256 Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query 170 VETLRAKFPHLNIQVDGGLGKETIPKAA-KAGANVIVAGTSVFTAADP 216 ++T+RA FP + + VD G+G + AA + G + ++ T+V A DP Sbjct 168 LKTMRAHFPDIPLVVDAGIGVPSHAAAAMELGFDAVLINTAVAKAGDP 215 >gi|32130192|sp|Q8YEZ2|THIG_BRUME Thiazole biosynthesis protein thiG Length=256 Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query 170 VETLRAKFPHLNIQVDGGLGKETIPKAA-KAGANVIVAGTSVFTAADP 216 ++T+RA FP + + VD G+G + AA + G + ++ T+V A DP Sbjct 168 LKTMRAHFPDIPLVVDAGIGVPSHAAAAMELGFDAVLINTAVAKAGDP 215 >gi|13124375|sp|O14300|OXA11_SCHPO Inner membrane protein oxa1-1, mitochondrial precursor (Cytochrome oxidase biogenesis protein 1-1) (Sp1) Length=374 Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 11/101 (10%) Query 41 HFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQ 100 + V L P+V S P P S EK+P+ F ++ NP K + +F K D Sbjct 273 NIVQGYILKNPVVRSKLGFAPLP---SIIEKQPSGF----TLITNPIKSLKEFYKGVRDG 325 Query 101 FTFHYEATQDPLHLVKLIKSKGIKAACAIKPGTSVDVLFEL 141 F YE Q + ++ +A I+P + L EL Sbjct 326 FKTQYEQLQKDVSR----RAVATTSASTIRPNSHYKKLKEL 362 >gi|32130187|sp|Q8G2U9|THIG_BRUSU Thiazole biosynthesis protein thiG Length=256 Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query 170 VETLRAKFPHLNIQVDGGLGKETIPKAA-KAGANVIVAGTSVFTAADP 216 ++T+RA FP + + VD G+G + AA + G + ++ T+V A DP Sbjct 168 LKTMRAHFPDIPLVVDAGIGVPSHAAAAMELGFDAVLINTAVAKAGDP 215 >gi|18202645|sp|Q98AZ6|THIG_RHILO Thiazole biosynthesis protein thiG Length=257 Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query 167 MPKVETLRAKFPHLNIQVDGGLGKET-IPKAAKAGANVIVAGTSVFTAADP 216 M + ++R FP + + VD GLG+ + + G + ++ T+V AADP Sbjct 165 MTALRSMRGHFPDVPLIVDAGLGRPSHAATVMELGFDAVLLNTAVARAADP 215 >gi|81307794|sp|Q4ZLQ1|HIS4_PSEU2 Gene info 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length=245 Score = 31.2 bits (69), Expect = 3.6, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query 156 GFGGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGK-ETIPKAAKAGANVIVAGT 208 F GQ D+ V + ++P+L IQ+ GG+ ETI KAG + ++ GT Sbjct 55 AFEGQPVNGDV---VTAIARRYPNLPIQIGGGIRSLETIEHYVKAGVSYVIIGT 105 >gi|91206941|sp|Q48C80|HIS4_PSE14 Gene info 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length=245 Score = 31.2 bits (69), Expect = 3.6, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query 156 GFGGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGK-ETIPKAAKAGANVIVAGT 208 F GQ D+ V + ++P+L IQ+ GG+ ETI KAG + ++ GT Sbjct 55 AFEGQPVNGDV---VTAIARRYPNLPIQIGGGIRSLETIEHYVKAGVSYVIIGT 105 >gi|67460362|sp|Q7V364|AROC_PROMP Gene info Chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase) Length=364 Score = 31.2 bits (69), Expect = 3.6, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 0/26 (0%) Query 46 ITLGQPIVTSLRRSVPRPGDASNTEK 71 ITLG PI +R RPGD SN E+ Sbjct 74 ITLGTPIAMMVRNKDQRPGDYSNLEQ 99 >gi|21903445|sp|Q15274|NADC_HUMAN Gene info Nicotinate-nucleotide pyrophosphorylase [carboxylating] (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase) (QPRTase) Length=297 Score = 30.8 bits (68), Expect = 3.9, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query 164 EDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADP 216 E++ P L+A+FP + ++ GG+ + +P+ +VI G + T A P Sbjct 227 EELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMG--MLTQAAP 277 >gi|97180276|sp|Q8GU86|PDR5_ORYSA Pleiotropic drug resistance protein 5 Length=1454 Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query 167 MPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 +PK+E ++ HL+I+ D +GK +P A N + S+F +++ Sbjct 135 LPKIEV---RYQHLDIEADVHVGKRALPTLLNATINTLEGLVSLFISSN 180 >gi|74671175|sp|Q4WNS8|ECM33_ASPFU Protein ecm33 precursor Length=398 Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%) Query 150 VMTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTS 209 V+T F G KF E MPK+E ++ +F N+Q G +T KA + ++ GT Sbjct 288 VVTGAVDFSG-KFDEVSMPKLENVKGQF---NLQSTGNFSCDTFDKAHN---DKVIRGTY 340 Query 210 VFTAADPH 217 AA+P+ Sbjct 341 KCKAAEPN 348 >gi|3041689|sp|P42405|HPS_BACSU 3-hexulose-6-phosphate synthase (HPS) (HUMPS) (D-arabino-3-hexulose-6-phosphate formaldehyde lyase) Length=210 Score = 30.8 bits (68), Expect = 4.3, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 38/75 (50%), Gaps = 0/75 (0%) Query 151 MTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSV 210 + V G+ Q ++ ++ T++ + + GG+ +T+P+ + ++++ G + Sbjct 131 ICVHTGYDLQAEGKNSFEELTTIKNTVKNAKTAIAGGIKLDTLPEVIQQKPDLVIVGGGI 190 Query 211 FTAADPHDVISFMKE 225 +AAD + S MK+ Sbjct 191 TSAADKAETASKMKQ 205 >gi|60392352|sp|Q603K2|HIS4_METCA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length=243 Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%) Query 170 VETLRAKFPHLNIQVDGGL-GKETIPKAAKAGANVIVAGTSVFTAADPH---DVISFMKE 225 + +R P + IQV GG+ +ETI AG + ++ GT +A PH DV + Sbjct 66 IHAIREACPDVEIQVGGGIRDEETIQGYLNAGVDFVIIGTKAVSA--PHFVSDVTAEFPN 123 Query 226 EVSKELRSRD 235 + L +RD Sbjct 124 HIIIGLDARD 133 >gi|31563079|sp|Q87UG3|HIS4_PSESM 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length=245 Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query 156 GFGGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGK-ETIPKAAKAGANVIVAGT 208 F GQ D+ V + ++P+L IQ+ GG+ ETI KAG + ++ GT Sbjct 55 AFEGQPVNGDV---VTAIAKRYPNLPIQIGGGIRSLETIEHYIKAGVSYVIIGT 105 >gi|1730919|sp|P52055|YPI1_VIBAL UPF0001 protein in pilT-proC intergenic region (ORF1) Length=233 Score = 30.8 bits (68), Expect = 4.6, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 16/115 (13%) Query 111 PLHLVKLIKSKGIKAACAIKPGTSVDVLFELA------PHLDMALVMTVEPGFGGQKFME 164 PL ++ + + G A K G + +FELA P+L + +M++ + Sbjct 123 PLQVLIQVNTSGE----ASKSGVTEAEVFELAELISRLPNLTLRGLMSIPANVSDYESQL 178 Query 165 DMMPKV----ETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 215 K+ +TL A+FP ++ G G T A +AG+ ++ GT++F A D Sbjct 179 HEFQKLATLKQTLEAQFPEIDTLSMGMSGDMT--AAIEAGSTMVRIGTAIFGARD 231 >gi|20141037|sp|Q9H4Z2|ZN335_HUMAN Gene info Zinc finger protein 335 Length=1342 Score = 30.8 bits (68), Expect = 4.6, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 12/116 (10%) Query 110 DPLHLVKLIKSKGIKAACAIKPGTSVDVLFELAPH-------LDMALVMT--VEPGF--- 157 D L +I +G + + A+ T++D+L ++ L +A+V + VE G Sbjct 771 DTLGGATIIYQQGAEESTAMATQTALDLLLNMSAQRELGGTALQVAVVKSEDVEAGLASP 830 Query 158 GGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTA 213 GGQ E P+V TL P + LG +P+ A G SV TA Sbjct 831 GGQPSPEGATPQVVTLHVAEPGGGAAAESQLGPPDLPQITLAPGPFGGTGYSVITA 886 >gi|21759297|sp|Q91X91|NADC_MOUSE Gene info Nicotinate-nucleotide pyrophosphorylase [carboxylating] (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase) (QPRTase) Length=299 Score = 30.4 bits (67), Expect = 5.1, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query 164 EDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADP 216 E++ P TL+A+FP ++++ GG+ + + + +VI G + T A P Sbjct 227 EELHPTAATLKARFPSVSVEASGGVTLDNLTQFCGTHIDVISLG--MLTQAAP 277 >gi|91206942|sp|Q4KJS5|HIS4_PSEF5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length=245 Score = 30.4 bits (67), Expect = 5.7, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query 170 VETLRAKFPHLNIQVDGGLGK-ETIPKAAKAGANVIVAGT 208 V + ++P+L IQ+ GG+ ETI KAG + ++ GT Sbjct 66 VTAIAKRYPNLPIQIGGGIRSLETIEHYVKAGVSYVIIGT 105 >gi|31563093|sp|Q88R42|HIS4_PSEPK Gene info 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length=245 Score = 30.4 bits (67), Expect = 5.7, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query 170 VETLRAKFPHLNIQVDGGLGK-ETIPKAAKAGANVIVAGT 208 V + ++P+L IQ+ GG+ ETI KAG + ++ GT Sbjct 66 VTAIAKRYPNLPIQIGGGIRSLETIEHYVKAGVSYVIIGT 105 >gi|32130190|sp|Q8UCD2|THIG_AGRT5 Gene info Thiazole biosynthesis protein thiG Length=257 Score = 30.4 bits (67), Expect = 5.8, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query 167 MPKVETLRAKFPHLNIQVDGGLGKET-IPKAAKAGANVIVAGTSVFTAADP 216 + ++++RA+FP + + VD G+G+ + + G + ++ T+V A DP Sbjct 165 LTALKSMRARFPEVPLIVDAGIGRPSHAVTVMELGYDAVLLNTAVAGAGDP 215 >gi|23822009|sp|Q8PV88|PYRF_METMA Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) Length=220 Score = 30.4 bits (67), Expect = 6.0, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 0/36 (0%) Query 199 AGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSR 234 AGA+ ++ G S++ A P + + EE+ ELR + Sbjct 185 AGADWVIVGRSIYKAESPKEAACEIAEEIQAELRGK 220 >gi|71153607|sp|Q5WH85|THIG_BACSK Gene info Thiazole biosynthesis protein thiG Length=263 Score = 30.0 bits (66), Expect = 8.1, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query 182 IQVDGGLGKET-IPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRS 233 I VD GLG + + KA + GA+ ++ T+V A DP + MK+ + L S Sbjct 183 IIVDAGLGSASDVAKAMELGADGVLMNTAVAKAKDPVKMALAMKQAIEAGLLS 235 >gi|47606188|sp|Q8P5R7|THIE_XANCP Thiamine-phosphate pyrophosphorylase (TMP pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length=207 Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 0/31 (0%) Query 186 GGLGKETIPKAAKAGANVIVAGTSVFTAADP 216 GG+ +P+ AGA++I + V+ AADP Sbjct 164 GGITPSQVPELVTAGADLIAVVSGVYAAADP 194 >gi|116256185|sp|Q31JD2|THIG_THICR Gene info Thiazole biosynthesis protein thiG Length=273 Score = 29.6 bits (65), Expect = 9.1, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query 170 VETLRAKFPHLNIQVDGGLGKET-IPKAAKAGANVIVAGTSVFTAADP 216 + +R +FP L + VD G+GK + +A + G N I+ ++V + +P Sbjct 182 LNAIRQRFPELTLIVDAGIGKPSHAVQALEMGYNGILLNSAVALSPNP 229 >gi|91206953|sp|Q31E65|HIS4_THICR Gene info 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length=246 Score = 29.6 bits (65), Expect = 9.8, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query 170 VETLRAKFPHLNIQVDGGLGK-ETIPKAAKAGANVIVAGT 208 V +R FP L IQ+ GG+ ETI KAG + + GT Sbjct 66 VYQVREAFPDLPIQIGGGIRDLETIEAYLKAGVSYCIIGT 105 >gi|3043366|sp|Q48907|HPS_METAM 3-hexulose-6-phosphate synthase (HPS) (D-arabino-3-hexulose-6-phosphate formaldehyde lyase) Length=209 Score = 29.6 bits (65), Expect = 9.8, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 0/32 (0%) Query 180 LNIQVDGGLGKETIPKAAKAGANVIVAGTSVF 211 L + V GG+ T+ + AGA +IVAG +++ Sbjct 161 LEVSVAGGVKPATVAQVKDAGATIIVAGAAIY 192 >gi|23822016|sp|Q8TS37|PYRF_METAC Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) Length=221 Score = 29.6 bits (65), Expect = 9.9, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 0/34 (0%) Query 199 AGANVIVAGTSVFTAADPHDVISFMKEEVSKELR 232 AGA+ ++ G S++ A P + + EE+ ELR Sbjct 185 AGADWVIVGRSIYKAESPKEAARQIAEEIQAELR 218
  Database: Non-redundant SwissProt sequences
    Posted date:  Mar 16, 2007  5:59 PM
  Number of letters in database: 88,903,512
  Number of sequences in database:  237,168
Lambda     K      H
   0.320    0.136    0.414 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 237168
Number of Hits to DB: 10617431
Number of extensions: 442384
Number of successful extensions: 1159
Number of sequences better than 10: 19
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 1166
Number of HSP's successfully gapped: 19
Length of query: 238
Length of database: 88903512
Length adjustment: 109
Effective length of query: 129
Effective length of database: 63052200
Effective search space: 8133733800
Effective search space used: 8133733800
T: 11
A: 40
X1: 16 (7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 65 (29.6 bits)