util
Interfaces 
FileDrop.Listener
FileDrop.TransferableObject.Fetcher
Classes 
AAMap
Alignment
AlignmentExporter
BlastPDB
ColorScheme
Constants
FastaFileFilter
FileDrop
FileDrop.Event
FileDrop.TransferableObject
FilterAlignment
ImageExporter
PDBFile
PdbFileOpener
PluginLoader
PngFileFilter
PrintUtilities
ResidueSelectionManager
RunMethods
ScreenConfig
SelectionManager
SequenceLogo
SequenceManager
SequenceOrderer