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java.lang.ObjectPDBinterpreter
util.PDBFile
public class PDBFile
This class uses the PDB library.
Constructor Summary | |
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PDBFile(java.lang.String filename,
java.lang.String chain)
Constructor for the PDB File menu. |
Method Summary | |
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void |
endPrimaryStructureSection()
This part is needed to get the primary sequence out of the PDB file. |
java.lang.String |
getPdbSequence()
Returns the (build) PDB sequence as a string. |
boolean |
hasKey(java.lang.String key)
Has-key boolean method. |
void |
read()
Reads and parses the input file. |
java.lang.String |
readLine()
Read one line of the file. |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public PDBFile(java.lang.String filename, java.lang.String chain)
filename
- chain
- Method Detail |
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public void read()
public java.lang.String readLine()
public boolean hasKey(java.lang.String key)
public void endPrimaryStructureSection()
public java.lang.String getPdbSequence()
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