parser
Class MfaParser

java.lang.Object
  extended by parser.MfaParser

public class MfaParser
extends java.lang.Object

This is the parser class for the MFA or FASTA files.


Constructor Summary
MfaParser()
           
 
Method Summary
 AlignObject read(java.lang.String mfafile)
          This method parses protein name and sequence of the MFA or FASTA file.
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

MfaParser

public MfaParser()
Method Detail

read

public AlignObject read(java.lang.String mfafile)
This method parses protein name and sequence of the MFA or FASTA file.

Parameters:
mfafile -
Returns:
AlignObject alignObject