Class Summary |
AlignObject |
This class does the representation of an alignment object. |
ClusterCoordinates |
This class represents the cluster coordinates. |
ClusterGroup |
This class defines a cluster group which stands for a subfamily of proteins. |
FuncResidueImpl |
Implementation of the FuncResidue Interface. |
Methods |
The object of that class is mainly used for passing information which methods are used
for the application. |
MouseSequenceListener |
MouseSequenceListener for listening on the mouse event from the alignment panel. |
PredictedPosition |
This class holds information about the predicted positions (SDPs) from the S3Det Output. |
ResidueCoordinates |
This class represents the residue coordinates. |
ResidueImpl |
Implementation of the Residue Interface. |
S3DetObject |
This class represents an object of the S3Det information. |
SequenceCluster |
This class provides information about which sequence belongs to which cluster from the S3Det. |
SequenceCoordinates |
This class contains information about the sequence coordinates from the S3Det. |
SequenceImpl |
Implementation of the Sequence Interface. |
UDMObject |
This class represents a user defined method (UDM) object, which
should be generic for a any file which gives position, amino acid and score. |
XDetObject |
This class does the representation of an XDet object. |