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java.lang.Objectutil.SequenceOrderer
public class SequenceOrderer
This helper class puts the sequence in order, so that they are put into cluster groups. It is used for the display of the subfamilies.
Constructor Summary | |
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SequenceOrderer(AlignObject alignObj,
S3DetObject s3detobj)
Constructor of the SequenceOrderer. |
Method Summary | |
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ClusterGroup[] |
getClusterGroups()
Retrieve the cluster groups from the sequences and the S3Det method. |
SequenceImpl[] |
getClusterSequences()
Returns all the sequences in the clustered order |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public SequenceOrderer(AlignObject alignObj, S3DetObject s3detobj)
alignObj
- s3detobj
- Method Detail |
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public ClusterGroup[] getClusterGroups()
public SequenceImpl[] getClusterSequences()
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