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Summary |
Top model | |||||||||||||||
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Sequence analysis |
Download FASTA version |
Secondary structure and disorder prediction [Show] |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |||||||||||||||||||||
Sequence | M | P | L | H | V | K | W | P | F | P | A | V | P | P | L | T | W | T | L | A | S | S | V | V | M | G | L | V | G | T | Y | S | C | F | W | T | K | Y | M | N | H | L | T | V | H | N | R | E | V | L | Y | E | L | I | E | K | R | G | P | A | ||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder | ? | ? | ? | ? | ? | ? | ? | ? | ? | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |||||||||||||||||||||
Sequence | T | P | L | I | T | V | S | N | H | Q | S | C | M | D | D | P | H | L | W | G | I | L | K | L | R | H | I | W | N | L | K | L | M | R | W | T | P | A | A | A | D | I | C | F | T | K | E | L | H | S | H | F | F | S | L | G | K | C | V | P | ||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder | ? | ? | ? | ? | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |||||||||||||||||||||
Sequence | V | C | R | G | A | E | F | F | Q | A | E | N | E | G | K | G | V | L | D | T | G | R | H | M | P | G | A | G | K | R | R | E | K | G | D | G | V | Y | Q | K | G | M | D | F | I | L | E | K | L | N | H | G | D | W | V | H | I | F | P | E | ||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |||||||||||||||||||||
Sequence | G | K | V | N | M | S | S | E | F | L | R | F | K | W | G | I | G | R | L | I | A | E | C | H | L | N | P | I | I | L | P | L | W | H | V | G | M | N | D | V | L | P | N | S | P | P | Y | F | P | R | F | G | Q | K | I | T | V | L | I | G | ||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder | ? | ? | ? | ? | ? | ? | ? | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | |||||||||||||||||||||||||||||
Sequence | K | P | F | S | A | L | P | V | L | E | R | L | R | A | E | N | K | S | A | V | E | M | R | K | A | L | T | D | F | I | Q | E | E | F | Q | H | L | K | T | Q | A | E | Q | L | H | N | H | L | Q | P | G | R | ||||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disorder confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Domain analysis [Show] |
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PDB 1iuq chain ARegion: 39 - 279 Phyre2
PDB 5f34 chain ARegion: 41 - 276 Phyre2
PDB 4mxn chain BRegion: 158 - 182 Phyre2
PDB 2vhi chain GRegion: 117 - 180 Phyre2
PDB 2vhh chain ARegion: 117 - 180 Phyre2
PDB 4cyy chain ARegion: 159 - 180 Phyre2
PDB 2cly chain ERegion: 242 - 286 Phyre2
PDB 1hru chain ARegion: 155 - 182 Phyre2
PDB 4hg3 chain CRegion: 149 - 182 Phyre2
PDB 1uf5 chain ARegion: 159 - 184 Phyre2
PDB 3ssu chain BRegion: 271 - 287 Phyre2
PDB 3wuy chain ARegion: 159 - 184 Phyre2
PDB 2cly chain B domain 1Region: 242 - 286 Phyre2
PDB 3hkx chain ARegion: 147 - 184 Phyre2
PDB 1jcu chain ARegion: 153 - 182 Phyre2
PDB 5kha chain ARegion: 159 - 180 Phyre2
PDB 2e11 chain BRegion: 149 - 180 Phyre2
PDB 3ilv chain ARegion: 159 - 180 Phyre2
PDB 3dla chain DRegion: 159 - 180 Phyre2
PDB 1ems chain BRegion: 146 - 180 Phyre2
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Detailed template information [Hide] |
Binding site prediction |
The top ranking model of your protein (d1iuqa_ 99.6% confidence) has been submitted to the 3DLigandSite server to predict potential binding sites.
Results will appear here when complete
Transmembrane helix prediction |
Transmembrane helices have been predicted in your sequence to adopt the topology shown below
Phyre is for non-commercial use only
Commercial users please contact Michael Sternberg
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis. | ||||||||||||||
Kelley LA et al.. Nature Protocols 10, 845-858 (2015)[pdf] [Citation link] | ||||||||||||||
If you use the binding site predictions from 3DLigandSite, please also cite: | ||||||||||||||
3DLigandSite: predicting ligand-binding sites using similar structures. | ||||||||||||||
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed] | ||||||||||||||
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Region: 39 - 279
Aligned: 218
Modelled: 213
Confidence: 99.6%
Identity: 19%
Fold: Glycerol-3-phosphate (1)-acyltransferase
Superfamily: Glycerol-3-phosphate (1)-acyltransferase
Family: Glycerol-3-phosphate (1)-acyltransferase
Region: 41 - 276
Aligned: 170
Modelled: 170
Confidence: 99.5%
Identity: 12%
PDB header:transferase
Chain: A: PDB Molecule:phosphatidylinositol mannoside acyltransferase;
PDBTitle: crystal structure of membrane associated pata from
mycobacterium2 smegmatis in complex with s-hexadecyl coenzyme a - p21
space group
Region: 158 - 182
Aligned: 25
Modelled: 25
Confidence: 44.1%
Identity: 16%
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative glycosyl hydrolase (parmer_00599) from2 parabacteroides merdae atcc 43184 at 1.95 a resolution
Region: 117 - 180
Aligned: 64
Modelled: 64
Confidence: 32.5%
Identity: 11%
PDB header:hydrolase
Chain: G: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
Region: 117 - 180
Aligned: 64
Modelled: 64
Confidence: 31.0%
Identity: 11%
PDB header:hydrolase
Chain: A: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
Region: 159 - 180
Aligned: 22
Modelled: 22
Confidence: 29.4%
Identity: 18%
PDB header:hydrolase
Chain: A: PDB Molecule:pantetheinase;
PDBTitle: the structure of vanin-1: defining the link between2 metabolic disease, oxidative stress and inflammation
Region: 242 - 286
Aligned: 45
Modelled: 45
Confidence: 28.3%
Identity: 18%
PDB header:hydrolase
Chain: E: PDB Molecule:atp synthase d chain, mitochondrial;
PDBTitle: subcomplex of the stator of bovine mitochondrial atp2 synthase
Region: 155 - 182
Aligned: 27
Modelled: 27
Confidence: 28.1%
Identity: 15%
Fold: YrdC/RibB
Superfamily: YrdC/RibB
Family: YrdC-like
Region: 149 - 182
Aligned: 34
Modelled: 34
Confidence: 26.6%
Identity: 15%
PDB header:hydrolase
Chain: C: PDB Molecule:probable hydrolase nit2;
PDBTitle: structural insights into yeast nit2: wild-type yeast nit2 in complex2 with alpha-ketoglutarate
Region: 159 - 184
Aligned: 26
Modelled: 26
Confidence: 22.3%
Identity: 19%
Fold: Carbon-nitrogen hydrolase
Superfamily: Carbon-nitrogen hydrolase
Family: Carbamilase
Region: 271 - 287
Aligned: 17
Modelled: 17
Confidence: 19.7%
Identity: 41%
PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin coil1a/1b fragment
Region: 159 - 184
Aligned: 26
Modelled: 26
Confidence: 18.3%
Identity: 31%
PDB header:hydrolase
Chain: A: PDB Molecule:nitrilase;
PDBTitle: crystal structure of nit6803
Region: 242 - 286
Aligned: 45
Modelled: 45
Confidence: 17.4%
Identity: 18%
Fold: ATP synthase D chain-like
Superfamily: ATP synthase D chain-like
Family: ATP synthase D chain-like
Region: 147 - 184
Aligned: 38
Modelled: 38
Confidence: 15.9%
Identity: 13%
PDB header:hydrolase
Chain: A: PDB Molecule:amidase;
PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp.
Region: 153 - 182
Aligned: 29
Modelled: 29
Confidence: 14.5%
Identity: 10%
Fold: YrdC/RibB
Superfamily: YrdC/RibB
Family: YrdC-like
Region: 159 - 180
Aligned: 22
Modelled: 22
Confidence: 14.4%
Identity: 27%
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad+ synthetase;
PDBTitle: structure of glutamine-dependent nad+ synthetase from acinetobacter2 baumannii in complex with adenosine diphosphate (adp)
Region: 149 - 180
Aligned: 32
Modelled: 32
Confidence: 14.3%
Identity: 22%
PDB header:hydrolase
Chain: B: PDB Molecule:hydrolase;
PDBTitle: the crystal structure of xc1258 from xanthomonas
campestris: a cn-2 hydrolase superfamily protein with an arsenic adduct
in the active3 site
Region: 159 - 180
Aligned: 22
Modelled: 22
Confidence: 14.1%
Identity: 27%
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii
Region: 159 - 180
Aligned: 22
Modelled: 22
Confidence: 13.9%
Identity: 23%
PDB header:ligase
Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don
Region: 146 - 180
Aligned: 35
Modelled: 35
Confidence: 13.8%
Identity: 11%
PDB header:antitumor protein
Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein;
PDBTitle: crystal structure of the c. elegans nitfhit protein