Quickphyre results for job tafa_____
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Structural Bioinformatics Group Imperial College London
[Phyre Server: 0.1][Fold Library (SCOP):][Fold Library (PDB): ][NR sequence DB: ][Dynamic FR engine: 1.0]

QuickPhyre Results for Job tafa_____

Please cite:

Protein structure prediction on the web: a case study using the Phyre server.
Kelley LA & Sternberg MJE Nature Protocols. 4, 363 - 371 (2009) [pdf]

Email: jcsanchez@cnb.csic.es
Job Code: a6b584ded5b11e7c
Description: tafa_____
Date: Tue Nov 27 14:14:14 GMT 2012


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Secondary Structure Prediction
Index.........10.........20.........30.........40.........50.........60.........70.........80.........90.........100.........110.........120.........130.........140.........150.........160.........170.........180.........190.........200.........210.........220.........230.........240.........250.........260.........270.........280.........290.
Query SequenceMPLHVKWPFPAVPPLTWTLASSVVMGLVGTYSCFWTKYMNHLTVHNREVLYELIEKRGPATPLITVSNHQSCMDDPHLWGILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSLGKCVPVCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWVHIFPEGKVNMSSEFLRFKWGIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQHLKTQAEQLHNHLQPGR
psipred   cccccccccccccch h h h h h h h h h h h h h h h h h h h h h ccccce e e e ch h h h h h h h h ccccccce e e e e cccch h h h h h h h h h cch h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h cccce e cccch h h h h h h h h h cccccccccccccccccccccch h h h h h h h h h h h ccce e e e e e cce e cccccccch h h h h h h h h h h ccccce e e e e e e e ch h h h ccccccccccccce e e e e e ccccch h h h h h h h h h cccch h h h h h h h h h h h h h h h h h h h h h h h h h h ccccccc
jnet   cccccccccccccch h h h h h h h h h h h h h h h h h h h h h h cccce e e e ch h h h h h h h h ccccccce e e e e ccccccch h h h h h h cccch h h h h h h h h h h h h h h h h h h h h h h h h h h h h h ccce e e e cccccch h h h h h h h ccccccccccccccccccccch h h h h h h h h h h h h ccce e e e e cccccccccccccch h h h h h h h h h ccccce e e e e e e e ccccccccccccccccccce e e e e ccccccch h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h h ccccccc
sspro   cccccccccccccch h h h h h h h h h h h h h h h h h h h h h h h h h cccccch h h h e ccccccccccce e e e e ccccccch h h h h h h ccccccccch ch h h h h h h h h h h h cch h h h h h h h h cccce ccccccch ch h h h h h ccccccccccccccccccccccch h h h h h h h h h h h ccce e e e e ccccccccccccccch h h h h h h h h ccccce e e e e e e e cccccccccccccccccce e e e e e ccccch h h h ch h h h h cccch h h h h h h h h h h h h h h h h h h h h h h h h h cccccccc
Consensus   cccccccccccccch h h h h h h h h h h h h h h h h h h h h h h cccce e e e ch h h h h h h h h ccccccce e e e e ccccccch h h h h h h cccch h h h h h h h h h h h h h h h h h h h h h h h h h h h h h cccce e e ccccch h h h h h h h h cccccccccccccccccccccch h h h h h h h h h h h ccce e e e e cccccccccccccch h h h h h h h h h ccccce e e e e e e e cccccccccccccccccce e e e e e ccccch h h h h h h h h h cccch h h h h h h h h h h h h h h h h h h h h h h h h h h ccccccc
Cons_prob   9988777778888677888888999999999999986467656646677777764689999789987785555667788766865444566677888777777665778898887587555467655455677765577666677777777777766589999999998689979996587558999877655778998876799987989888665434678987778999868999778888577778876556558999999999999999999999999866889999
 
Disorder Prediction
Index.........10.........20.........30.........40.........50.........60.........70.........80.........90.........100.........110.........120.........130.........140.........150.........160.........170.........180.........190.........200.........210.........220.........230.........240.........250.........260.........270.........280.........290.
Disopred  dddddoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooododooooooooooooooooooooooooooooooooooooooooodoodddddddddddddddddddddddddddooooooooooooooooooooooooooododddooooooooooooooooooooooooooooooooododooooooooooooooooooooooooooooddoddoooooooooooooooooooooooooooodddddd
Diso_prob 9886631000000121012110012210000000010111000010000111223321100000000000000000001111454544433422311223222112221200021201101123344645565555565566677677777778775322100000010101000000001234535662221211000001121010000000001214145253233321100000000000012234243663664412310101012211121110112144889999
Prosite                       >tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.>tafa_____ : PS00013 PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid attachment site.                                                                                                                                                                                                                                                                   

FINALLY - a new fold library has been installed! Let me know if you have any problems.

To predict functional residues and GO classification, try ConFunc
Fold Recognition
View AlignmentsSCOP CodeView ModelE-valueEstimated
Precision		BioTextFold/PDB descriptorSuperfamilyFamily(beta-test)
alignments d1iuqa_
(length:367)
14% i.d.
0.0001995 % n/a Glycerol-3-phosphate (1)-acyltransferase Glycerol-3-phosphate (1)-acyltransferase Glycerol-3-phosphate (1)-acyltransferase n/a
alignments d1rrva_
(length:401)
9% i.d.
0.03895 % n/a UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Gtf glycosyltransferase n/a
alignments d1iira_
(length:401)
7% i.d.
0.05995 % n/a UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Gtf glycosyltransferase n/a
alignments c2iyfA_
(length:430)
9% i.d.
0.190 % n/a PDB header:transferaseChain: A: PDB Molecule:oleandomycin glycosyltransferase; PDBTitle: the crystal structure of macrolide glycosyltransferases: a2 blueprint for antibiotic engineering n/a
alignments c2pq6A_
(length:482)
10% i.d.
0.1290 % n/a PDB header:transferaseChain: A: PDB Molecule:udp-glucuronosyl/udp-glucosyltransferase; PDBTitle: crystal structure of medicago truncatula ugt85h2- insights2 into the structural basis of a multifunctional (iso)3 flavonoid glycosyltransferase n/a
alignments c1ykdB_
(length:398)
8% i.d.
0.1290 % n/a PDB header:lyaseChain: B: PDB Molecule:adenylate cyclase; PDBTitle: crystal structure of the tandem gaf domains from a cyanobacterial2 adenylyl cyclase: novel modes of ligand-binding and dimerization n/a
alignments c2r8cG_
(length:426)
5% i.d.
0.1790 % n/a PDB header:structural genomics, unknown functionChain: G: PDB Molecule:putative amidohydrolase; PDBTitle: crystal structure of uncharacterized protein eaj56179 n/a
alignments c2iyaB_
(length:424)
8% i.d.
0.1990 % n/a PDB header:transferaseChain: B: PDB Molecule:oleandomycin glycosyltransferase; PDBTitle: the crystal structure of macrolide glycosyltransferases: a2 blueprint for antibiotic engineering n/a
alignments d1f0ka_
(length:351)
9% i.d.
0.2290 % n/a UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Peptidoglycan biosynthesis glycosyltransferase MurG n/a
alignments c2acvA_
(length:463)
13% i.d.
0.2390 % n/a PDB header:transferaseChain: A: PDB Molecule:triterpene udp-glucosyl transferase ugt71g1; PDBTitle: crystal structure of medicago truncatula ugt71g1 n/a